Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 RN7SL204P-201ENST00000582831 262 ntBASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 LINC02560-201ENST00000596379 459 ntBASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 LINC02084-201ENST00000606069 1096 ntBASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 MIR6069-201ENST00000620069 79 ntBASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AL033527.5-202ENST00000641632 1098 ntBASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC002472.2-201ENST00000442739 958 ntBASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC010336.2-201ENST00000564226 506 ntBASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC009407.1-201ENST00000568958 598 ntBASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC126365.1-201ENST00000578585 1514 ntBASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.38■□□□□ 0.53
SMARCC2Q8TAQ2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 AL513477.1-201ENST00000602865 2407 ntBASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMARCC2Q8TAQ2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms