Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PRAL-201ENST00000624952 3286 ntBASIC16.85■□□□□ 0.29
BEST2Q8NFU1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AL512384.1-201ENST00000406683 331 ntBASIC16.85■□□□□ 0.29
BEST2Q8NFU1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 GIMAP3P-201ENST00000495150 836 ntBASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AC133539.2-201ENST00000604757 467 ntBASIC16.85■□□□□ 0.29
BEST2Q8NFU1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AL033527.5-201ENST00000641382 801 ntBASIC16.85■□□□□ 0.29
BEST2Q8NFU1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST2Q8NFU1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 AC134915.1-201ENST00000426461 574 ntBASIC16.84■□□□□ 0.29
BEST2Q8NFU1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST2Q8NFU1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
BEST2Q8NFU1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BEST2Q8NFU1 FLJ16779-201ENST00000612722 7638 ntBASIC16.83■□□□□ 0.29
BEST2Q8NFU1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms