Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 MIR4750-201ENST00000584564 56 ntBASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 SAMD11P1-201ENST00000571429 661 ntBASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CFAP43Q8NDM7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 RN7SL181P-201ENST00000462921 277 ntBASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AC024681.1-201ENST00000521917 487 ntBASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 RN7SL48P-201ENST00000579283 293 ntBASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AC073413.1-201ENST00000603927 732 ntBASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AL138799.1-201ENST00000448213 1675 ntBASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 HLA-K-203ENST00000430151 1046 ntBASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC24.02■■□□□ 1.44
CFAP43Q8NDM7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 PRSS30P-206ENST00000641773 873 ntBASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC24.01■■□□□ 1.43
CFAP43Q8NDM7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC24■■□□□ 1.43
CFAP43Q8NDM7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 AC006480.2-201ENST00000609770 1337 ntBASIC24■■□□□ 1.43
CFAP43Q8NDM7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CFAP43Q8NDM7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CFAP43Q8NDM7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CFAP43Q8NDM7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC24■■□□□ 1.43
CFAP43Q8NDM7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC24■■□□□ 1.43
CFAP43Q8NDM7 AL158070.2-201ENST00000623713 1621 ntBASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms