Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 SPCS2P4-201ENST00000436160 681 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 TIMM8BP1-201ENST00000452384 211 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 PHKG1P2-201ENST00000457537 863 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 AC079140.1-201ENST00000508039 487 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 KRT8P37-201ENST00000451609 1420 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 AGAP7P-201ENST00000582299 2062 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 AGAP14-201ENST00000624701 2060 ntBASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN22Q8N7P3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 AC104581.4-201ENST00000623126 3052 ntBASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 SPDYE11-202ENST00000450699 704 ntBASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 SPDYE9P-201ENST00000570642 692 ntBASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 SPDYE10P-202ENST00000612005 668 ntBASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 SPDYE8P-202ENST00000612377 668 ntBASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN22Q8N7P3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AL136982.4-201ENST00000437689 1740 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 MROH4P-201ENST00000431302 1578 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms