Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 DOC2GP-202ENST00000514950 1163 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AC010336.2-201ENST00000564226 506 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AC024267.1-201ENST00000582320 895 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AC004790.1-201ENST00000612686 536 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 NFIC-211ENST00000641145 8399 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 PKD1P5-201ENST00000532415 10291 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 AC068418.2-201ENST00000577309 3703 ntBASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC33Q8N5R6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 AC092127.1-201ENST00000567093 3455 ntBASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 SPDYE18-201ENST00000510091 1050 ntBASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 CHCHD2P3-201ENST00000603038 451 ntBASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 AL691432.1-201ENST00000596308 1422 ntBASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC33Q8N5R6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms