Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 HNRNPUP1-201ENST00000554987 333 ntBASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 AL121723.1-201ENST00000445194 1519 ntBASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 PCDHA1-201ENST00000378133 2726 ntBASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 CICP6-201ENST00000457191 2729 ntBASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SYNPOQ8N3V7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 MSTO2P-201ENST00000314835 1709 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 GOLGA2P4-201ENST00000441462 777 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 AC025279.2-201ENST00000569730 653 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 GNRHR2-203ENST00000581100 1187 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 AC009542.2-202ENST00000619004 1067 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 DRD5P1-201ENST00000456605 1438 ntBASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPOQ8N3V7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms