Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC105Q8IYK2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 AC022532.1-201ENST00000624563 1728 ntBASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 DGCR5-201ENST00000399539 862 ntBASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 AC104794.3-201ENST00000566840 1248 ntBASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 AC009407.1-201ENST00000568958 598 ntBASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC105Q8IYK2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 AP3S2-216ENST00000617003 1561 ntBASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
CCDC105Q8IYK2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AC112492.5-201ENST00000421897 457 ntBASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AC011495.1-201ENST00000498085 584 ntBASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AC105233.2-201ENST00000523697 349 ntBASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AF228730.5-201ENST00000530288 346 ntBASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 KRT17P8-201ENST00000540749 863 ntBASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 RAB43P1-201ENST00000561790 589 ntBASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CCDC105Q8IYK2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC105Q8IYK2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC105Q8IYK2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC105Q8IYK2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC105Q8IYK2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17■□□□□ 0.31
CCDC105Q8IYK2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC105Q8IYK2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC105Q8IYK2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms