Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TOMM22P5-201ENST00000416399 439 ntBASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 SERBP1P5-201ENST00000510079 1181 ntBASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 RN7SL204P-201ENST00000582831 262 ntBASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
SCUBE3Q8IX30 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 SPDYE19P-201ENST00000338590 713 ntBASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 AC236430.1-201ENST00000402231 743 ntBASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 MEIS3P1-201ENST00000495167 958 ntBASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 DOC2GP-202ENST00000514950 1163 ntBASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 LINC02560-201ENST00000596379 459 ntBASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCUBE3Q8IX30 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 SSR4P1-203ENST00000599569 2260 ntBASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms