Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 AL442647.2-201ENST00000429864 857 ntBASIC16.69■□□□□ 0.26
RNF135Q8IUD6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 AL365330.1-201ENST00000607459 531 ntBASIC16.69■□□□□ 0.26
RNF135Q8IUD6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 MIR663B-201ENST00000408361 115 ntBASIC16.68■□□□□ 0.26
RNF135Q8IUD6 CALR4P-201ENST00000431943 946 ntBASIC16.68■□□□□ 0.26
RNF135Q8IUD6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AL139010.1-201ENST00000454878 894 ntBASIC16.68■□□□□ 0.26
RNF135Q8IUD6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AC079328.1-201ENST00000560358 952 ntBASIC16.68■□□□□ 0.26
RNF135Q8IUD6 RN7SL560P-201ENST00000577943 264 ntBASIC16.68■□□□□ 0.26
RNF135Q8IUD6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF135Q8IUD6 AC005622.1-201ENST00000636801 1703 ntBASIC16.67■□□□□ 0.26
RNF135Q8IUD6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 AL589702.1-201ENST00000641229 1509 ntBASIC16.67■□□□□ 0.26
RNF135Q8IUD6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms