Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 TBC1D3J-201ENST00000620719 1426 ntBASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PTF1AQ7RTS3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 RN7SKP214-201ENST00000364208 315 ntBASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 AC097065.1-201ENST00000425737 517 ntBASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 AL353637.1-201ENST00000451571 732 ntBASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTF1AQ7RTS3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 FLJ38576-201ENST00000623820 2459 ntBASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PTF1AQ7RTS3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 INE2-201ENST00000630399 1874 ntBASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 AL627231.1-201ENST00000394467 1125 ntBASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTF1AQ7RTS3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms