Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AC004840.1-201ENST00000636359 365 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AL009178.2-201ENST00000597278 2719 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 AC098614.1-201ENST00000368528 745 ntBASIC16.52■□□□□ 0.24
RNF43Q68DV7 FO393414.2-201ENST00000405153 598 ntBASIC16.52■□□□□ 0.24
RNF43Q68DV7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 AC114501.2-201ENST00000439631 535 ntBASIC16.52■□□□□ 0.24
RNF43Q68DV7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF43Q68DV7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF43Q68DV7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF43Q68DV7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF43Q68DV7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF43Q68DV7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF43Q68DV7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF43Q68DV7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF43Q68DV7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF43Q68DV7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF43Q68DV7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
RNF43Q68DV7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 AC004987.2-201ENST00000395959 1148 ntBASIC16.51■□□□□ 0.23
RNF43Q68DV7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 RN7SL618P-201ENST00000477850 296 ntBASIC16.51■□□□□ 0.23
RNF43Q68DV7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 AC140912.1-201ENST00000577171 1054 ntBASIC16.51■□□□□ 0.23
RNF43Q68DV7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms