Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 AL133267.1-201ENST00000398220 340 ntBASIC16.3■□□□□ 0.2
LRRC38Q5VT99 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 RPL13P2-201ENST00000440687 659 ntBASIC16.3■□□□□ 0.2
LRRC38Q5VT99 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 LINC00628-201ENST00000628516 1289 ntBASIC16.3■□□□□ 0.2
LRRC38Q5VT99 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 GHSR-202ENST00000427970 912 ntBASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AC004967.1-201ENST00000453589 447 ntBASIC16.29■□□□□ 0.2
LRRC38Q5VT99 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AC092865.5-201ENST00000545435 363 ntBASIC16.29■□□□□ 0.2
LRRC38Q5VT99 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SNHG9-202ENST00000564014 471 ntBASIC16.29■□□□□ 0.2
LRRC38Q5VT99 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.29■□□□□ 0.2
LRRC38Q5VT99 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC38Q5VT99 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms