Protein–RNA interactions for Protein: Q5EBN2

TRIM61, Putative tripartite motif-containing protein 61, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61Q5EBN2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 AL133466.1-201ENST00000447582 150 ntBASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 IMP3P2-201ENST00000489760 475 ntBASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 MIR4722-201ENST00000578292 60 ntBASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 MIR4706-201ENST00000582134 82 ntBASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 AC007663.3-201ENST00000609632 465 ntBASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM61Q5EBN2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM61Q5EBN2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 CYP46A4P-201ENST00000414953 267 ntBASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 COX5BP1-201ENST00000507622 393 ntBASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 U62317.3-201ENST00000608319 855 ntBASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 AC097724.1-201ENST00000609581 426 ntBASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM61Q5EBN2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LRRC59-203ENST00000576448 1531 ntBASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 TMEM198B-204ENST00000484016 896 ntBASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 AC244157.2-201ENST00000616239 1006 ntBASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 AP001505.2-201ENST00000616815 443 ntBASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM61Q5EBN2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms