Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC006480.2-201ENST00000609770 1337 ntBASIC19.23■□□□□ 0.67
DDR1Q08345 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
DDR1Q08345 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDR1Q08345 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DDR1Q08345 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
DDR1Q08345 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.22■□□□□ 0.67
DDR1Q08345 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDR1Q08345 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDR1Q08345 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.22■□□□□ 0.67
DDR1Q08345 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.22■□□□□ 0.67
DDR1Q08345 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.22■□□□□ 0.67
DDR1Q08345 AC007274.2-201ENST00000421675 662 ntBASIC19.22■□□□□ 0.67
DDR1Q08345 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.22■□□□□ 0.67
DDR1Q08345 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.22■□□□□ 0.67
DDR1Q08345 AC005740.2-201ENST00000511085 419 ntBASIC19.22■□□□□ 0.67
DDR1Q08345 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.22■□□□□ 0.67
DDR1Q08345 RN7SL555P-201ENST00000584742 339 ntBASIC19.22■□□□□ 0.67
DDR1Q08345 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.22■□□□□ 0.67
DDR1Q08345 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.22■□□□□ 0.67
DDR1Q08345 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.22■□□□□ 0.67
DDR1Q08345 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDR1Q08345 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDR1Q08345 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.22■□□□□ 0.67
DDR1Q08345 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDR1Q08345 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.21■□□□□ 0.67
DDR1Q08345 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.21■□□□□ 0.67
DDR1Q08345 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DDR1Q08345 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DDR1Q08345 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.21■□□□□ 0.67
DDR1Q08345 AL008707.1-201ENST00000422498 534 ntBASIC19.21■□□□□ 0.67
DDR1Q08345 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.21■□□□□ 0.67
DDR1Q08345 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.21■□□□□ 0.67
DDR1Q08345 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.21■□□□□ 0.67
DDR1Q08345 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.21■□□□□ 0.67
DDR1Q08345 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.21■□□□□ 0.67
DDR1Q08345 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDR1Q08345 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDR1Q08345 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DDR1Q08345 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
DDR1Q08345 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
DDR1Q08345 KRT8P29-201ENST00000420409 1371 ntBASIC19.2■□□□□ 0.66
DDR1Q08345 AC011676.5-201ENST00000624864 2660 ntBASIC19.2■□□□□ 0.66
DDR1Q08345 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DDR1Q08345 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.2■□□□□ 0.66
DDR1Q08345 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDR1Q08345 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.2■□□□□ 0.66
DDR1Q08345 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DDR1Q08345 RNMTL1P1-201ENST00000454103 560 ntBASIC19.2■□□□□ 0.66
DDR1Q08345 AC012618.1-201ENST00000461223 412 ntBASIC19.2■□□□□ 0.66
DDR1Q08345 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.2■□□□□ 0.66
DDR1Q08345 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.2■□□□□ 0.66
DDR1Q08345 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.2■□□□□ 0.66
DDR1Q08345 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.2■□□□□ 0.66
DDR1Q08345 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.2■□□□□ 0.66
DDR1Q08345 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.2■□□□□ 0.66
DDR1Q08345 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDR1Q08345 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms