Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.33□□□□□ -0.28
SSBP1Q04837 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.33□□□□□ -0.28
SSBP1Q04837 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.33□□□□□ -0.28
SSBP1Q04837 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 AC092474.2-201ENST00000424288 719 ntBASIC13.33□□□□□ -0.28
SSBP1Q04837 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 ATP5G2P1-201ENST00000433580 426 ntBASIC13.33□□□□□ -0.28
SSBP1Q04837 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SSBP1Q04837 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.33□□□□□ -0.28
SSBP1Q04837 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.33□□□□□ -0.28
SSBP1Q04837 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.33□□□□□ -0.28
SSBP1Q04837 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SSBP1Q04837 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SSBP1Q04837 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 AC027601.5-201ENST00000624065 2482 ntBASIC13.33□□□□□ -0.28
SSBP1Q04837 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SSBP1Q04837 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SSBP1Q04837 AC113367.3-201ENST00000508316 1912 ntBASIC13.33□□□□□ -0.28
SSBP1Q04837 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.33□□□□□ -0.28
SSBP1Q04837 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SSBP1Q04837 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SSBP1Q04837 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 AL513480.1-201ENST00000451731 511 ntBASIC13.32□□□□□ -0.28
SSBP1Q04837 PHKG1P2-201ENST00000457537 863 ntBASIC13.32□□□□□ -0.28
SSBP1Q04837 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.32□□□□□ -0.28
SSBP1Q04837 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.32□□□□□ -0.28
SSBP1Q04837 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SSBP1Q04837 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms