Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H3AP68431 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H3AP68431 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 RPL5P21-201ENST00000404620 815 ntBASIC13.75□□□□□ -0.21
HIST1H3AP68431 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 KLF2P3-201ENST00000451977 1087 ntBASIC13.75□□□□□ -0.21
HIST1H3AP68431 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 AC140878.1-201ENST00000565277 250 ntBASIC13.75□□□□□ -0.21
HIST1H3AP68431 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H3AP68431 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HIST1H3AP68431 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 RPL13P2-201ENST00000440687 659 ntBASIC13.74□□□□□ -0.21
HIST1H3AP68431 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AL512361.1-201ENST00000554200 418 ntBASIC13.74□□□□□ -0.21
HIST1H3AP68431 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AC010336.2-201ENST00000564226 506 ntBASIC13.74□□□□□ -0.21
HIST1H3AP68431 AC004449.1-201ENST00000564240 433 ntBASIC13.74□□□□□ -0.21
HIST1H3AP68431 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AC073592.8-201ENST00000624126 511 ntBASIC13.74□□□□□ -0.21
HIST1H3AP68431 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms