Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.82□□□□□ -0.04
TRA2BP62995 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.82□□□□□ -0.04
TRA2BP62995 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
TRA2BP62995 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRA2BP62995 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRA2BP62995 BTBD7P1-201ENST00000447253 1453 ntBASIC14.82□□□□□ -0.04
TRA2BP62995 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRA2BP62995 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRA2BP62995 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRA2BP62995 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRA2BP62995 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.81□□□□□ -0.04
TRA2BP62995 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 AC148477.4-201ENST00000613430 1793 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.81□□□□□ -0.04
TRA2BP62995 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.81□□□□□ -0.04
TRA2BP62995 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRA2BP62995 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.81□□□□□ -0.04
TRA2BP62995 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.81□□□□□ -0.04
TRA2BP62995 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.81□□□□□ -0.04
TRA2BP62995 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.81□□□□□ -0.04
TRA2BP62995 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.81□□□□□ -0.04
TRA2BP62995 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 KRT18P43-201ENST00000469825 1281 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 LINC01115-203ENST00000606068 577 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 AC006538.3-201ENST00000612495 578 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 AL645728.2-202ENST00000641679 227 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 AL109936.8-201ENST00000641772 604 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.81□□□□□ -0.04
TRA2BP62995 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.81□□□□□ -0.04
TRA2BP62995 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
TRA2BP62995 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRA2BP62995 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.8□□□□□ -0.04
TRA2BP62995 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRA2BP62995 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.8□□□□□ -0.04
TRA2BP62995 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRA2BP62995 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRA2BP62995 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.8□□□□□ -0.04
TRA2BP62995 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.8□□□□□ -0.04
TRA2BP62995 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
TRA2BP62995 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TRA2BP62995 KRT18P64-201ENST00000434946 1219 ntBASIC14.8□□□□□ -0.04
TRA2BP62995 AC114501.2-201ENST00000439631 535 ntBASIC14.8□□□□□ -0.04
TRA2BP62995 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.8□□□□□ -0.04
TRA2BP62995 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.8□□□□□ -0.04
TRA2BP62995 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRA2BP62995 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.8□□□□□ -0.04
TRA2BP62995 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRA2BP62995 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.8□□□□□ -0.04
TRA2BP62995 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRA2BP62995 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms