Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 MRPL20P1-201ENST00000400819 433 ntBASIC11.18□□□□□ -0.62
RPL39P62891 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.18□□□□□ -0.62
RPL39P62891 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.18□□□□□ -0.62
RPL39P62891 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.18□□□□□ -0.62
RPL39P62891 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.18□□□□□ -0.62
RPL39P62891 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.18□□□□□ -0.62
RPL39P62891 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 OR7E47P-204ENST00000575924 449 ntBASIC11.18□□□□□ -0.62
RPL39P62891 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.18□□□□□ -0.62
RPL39P62891 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.18□□□□□ -0.62
RPL39P62891 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 AL589702.1-201ENST00000641229 1509 ntBASIC11.18□□□□□ -0.62
RPL39P62891 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.17□□□□□ -0.62
RPL39P62891 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 AC140479.7-201ENST00000636301 2332 ntBASIC11.17□□□□□ -0.62
RPL39P62891 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 FAM185BP-201ENST00000443595 716 ntBASIC11.17□□□□□ -0.62
RPL39P62891 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.17□□□□□ -0.62
RPL39P62891 KRT18P34-201ENST00000488218 1270 ntBASIC11.17□□□□□ -0.62
RPL39P62891 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.17□□□□□ -0.62
RPL39P62891 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.17□□□□□ -0.62
RPL39P62891 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.17□□□□□ -0.62
RPL39P62891 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.17□□□□□ -0.62
RPL39P62891 MIR1199-201ENST00000621445 119 ntBASIC11.17□□□□□ -0.62
RPL39P62891 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms