Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCR4P61073 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 AC005252.3-201ENST00000623855 2258 ntBASIC14.38□□□□□ -0.11
CXCR4P61073 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CXCR4P61073 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CXCR4P61073 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.37□□□□□ -0.11
CXCR4P61073 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.37□□□□□ -0.11
CXCR4P61073 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.37□□□□□ -0.11
CXCR4P61073 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
CXCR4P61073 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CXCR4P61073 KRT18P67-201ENST00000432816 1264 ntBASIC14.37□□□□□ -0.11
CXCR4P61073 PRSS29P-201ENST00000440800 595 ntBASIC14.37□□□□□ -0.11
CXCR4P61073 AC243562.2-201ENST00000561247 970 ntBASIC14.37□□□□□ -0.11
CXCR4P61073 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 AC002347.1-201ENST00000569543 541 ntBASIC14.37□□□□□ -0.11
CXCR4P61073 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.37□□□□□ -0.11
CXCR4P61073 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 AC018892.3-201ENST00000623986 2499 ntBASIC14.37□□□□□ -0.11
CXCR4P61073 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CXCR4P61073 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.37□□□□□ -0.11
CXCR4P61073 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CXCR4P61073 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CXCR4P61073 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.36□□□□□ -0.11
CXCR4P61073 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 AC092910.1-201ENST00000482027 1129 ntBASIC14.36□□□□□ -0.11
CXCR4P61073 AC108751.1-201ENST00000490852 363 ntBASIC14.36□□□□□ -0.11
CXCR4P61073 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 UNC93B7-201ENST00000509439 705 ntBASIC14.36□□□□□ -0.11
CXCR4P61073 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 AL121912.1-201ENST00000603683 238 ntBASIC14.36□□□□□ -0.11
CXCR4P61073 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCR4P61073 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCR4P61073 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCR4P61073 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms