Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.4■□□□□ 0.54
PPP4CP60510 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PPP4CP60510 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PPP4CP60510 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.4■□□□□ 0.54
PPP4CP60510 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.4■□□□□ 0.54
PPP4CP60510 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 TUBB1P2-201ENST00000422712 1306 ntBASIC18.4■□□□□ 0.54
PPP4CP60510 TUBB1P1-201ENST00000503144 1300 ntBASIC18.4■□□□□ 0.54
PPP4CP60510 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PPP4CP60510 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PPP4CP60510 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP4CP60510 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PPP4CP60510 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PPP4CP60510 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
PPP4CP60510 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
PPP4CP60510 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PPP4CP60510 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4CP60510 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.39■□□□□ 0.53
PPP4CP60510 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PPP4CP60510 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4CP60510 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.39■□□□□ 0.53
PPP4CP60510 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.39■□□□□ 0.53
PPP4CP60510 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4CP60510 DUX4L45-201ENST00000566406 1057 ntBASIC18.39■□□□□ 0.53
PPP4CP60510 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.39■□□□□ 0.53
PPP4CP60510 SAMD11P1-201ENST00000571429 661 ntBASIC18.39■□□□□ 0.53
PPP4CP60510 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.39■□□□□ 0.53
PPP4CP60510 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 PCDHA1-201ENST00000378133 2726 ntBASIC18.39■□□□□ 0.53
PPP4CP60510 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4CP60510 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP4CP60510 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP4CP60510 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
PPP4CP60510 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 AP003680.1-201ENST00000598970 3660 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 AL158070.2-201ENST00000623713 1621 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.38■□□□□ 0.53
PPP4CP60510 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
PPP4CP60510 FAM197Y7-201ENST00000432892 766 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 AC092658.1-201ENST00000505836 891 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 AC078819.1-201ENST00000547454 765 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 AC012085.1-201ENST00000548270 765 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 AC244517.3-201ENST00000616254 1235 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.38■□□□□ 0.53
PPP4CP60510 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP4CP60510 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PPP4CP60510 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP4CP60510 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PPP4CP60510 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PPP4CP60510 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PPP4CP60510 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.37■□□□□ 0.53
PPP4CP60510 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP4CP60510 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.37■□□□□ 0.53
PPP4CP60510 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP4CP60510 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.37■□□□□ 0.53
PPP4CP60510 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms