Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 AC055876.2-201ENST00000531834 546 ntBASIC14.19□□□□□ -0.14
SUMO3P55854 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.19□□□□□ -0.14
SUMO3P55854 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.19□□□□□ -0.14
SUMO3P55854 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.19□□□□□ -0.14
SUMO3P55854 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
SUMO3P55854 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SUMO3P55854 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.19□□□□□ -0.14
SUMO3P55854 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.19□□□□□ -0.14
SUMO3P55854 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
SUMO3P55854 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SUMO3P55854 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SUMO3P55854 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 AC009090.5-201ENST00000624886 2285 ntBASIC14.18□□□□□ -0.14
SUMO3P55854 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.18□□□□□ -0.14
SUMO3P55854 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SUMO3P55854 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SUMO3P55854 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 SPDYE19P-201ENST00000338590 713 ntBASIC14.18□□□□□ -0.14
SUMO3P55854 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 SPTLC1P1-201ENST00000447199 261 ntBASIC14.18□□□□□ -0.14
SUMO3P55854 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.18□□□□□ -0.14
SUMO3P55854 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SUMO3P55854 AC126365.1-201ENST00000578585 1514 ntBASIC14.18□□□□□ -0.14
SUMO3P55854 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.18□□□□□ -0.14
SUMO3P55854 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.18□□□□□ -0.14
SUMO3P55854 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 AC136621.1-201ENST00000624017 2304 ntBASIC14.18□□□□□ -0.14
SUMO3P55854 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SUMO3P55854 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms