Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH13P55290 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH13P55290 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDH13P55290 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH13P55290 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH13P55290 MKNK2P1-201ENST00000437526 628 ntBASIC15.42■□□□□ 0.06
CDH13P55290 EEF1DP4-201ENST00000446006 880 ntBASIC15.42■□□□□ 0.06
CDH13P55290 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH13P55290 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH13P55290 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 HNRNPUP1-201ENST00000554987 333 ntBASIC15.42■□□□□ 0.06
CDH13P55290 MTDHP5-201ENST00000598980 586 ntBASIC15.42■□□□□ 0.06
CDH13P55290 AC097359.3-201ENST00000603982 1210 ntBASIC15.42■□□□□ 0.06
CDH13P55290 AC026979.3-201ENST00000607315 403 ntBASIC15.42■□□□□ 0.06
CDH13P55290 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH13P55290 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 AC007686.3-201ENST00000619017 3487 ntBASIC15.42■□□□□ 0.06
CDH13P55290 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH13P55290 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CDH13P55290 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH13P55290 AC126755.1-201ENST00000525846 6405 ntBASIC15.42■□□□□ 0.06
CDH13P55290 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH13P55290 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDH13P55290 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 PCDHA3-202ENST00000532566 4594 ntBASIC15.41■□□□□ 0.06
CDH13P55290 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 AGAP7P-201ENST00000582299 2062 ntBASIC15.41■□□□□ 0.06
CDH13P55290 AGAP14-201ENST00000624701 2060 ntBASIC15.41■□□□□ 0.06
CDH13P55290 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDH13P55290 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 AL022342.1-201ENST00000400363 863 ntBASIC15.41■□□□□ 0.06
CDH13P55290 AZGP1P1-201ENST00000411909 902 ntBASIC15.41■□□□□ 0.06
CDH13P55290 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.41■□□□□ 0.06
CDH13P55290 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDH13P55290 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH13P55290 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH13P55290 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH13P55290 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms