Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDH4P55283 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16■□□□□ 0.15
CDH4P55283 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDH4P55283 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16■□□□□ 0.15
CDH4P55283 AC134915.1-201ENST00000426461 574 ntBASIC16■□□□□ 0.15
CDH4P55283 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16■□□□□ 0.15
CDH4P55283 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16■□□□□ 0.15
CDH4P55283 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16■□□□□ 0.15
CDH4P55283 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16■□□□□ 0.15
CDH4P55283 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16■□□□□ 0.15
CDH4P55283 AC012645.4-201ENST00000610691 1061 ntBASIC16■□□□□ 0.15
CDH4P55283 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16■□□□□ 0.15
CDH4P55283 HLA-DQB2-231ENST00000435145 2026 ntBASIC16■□□□□ 0.15
CDH4P55283 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16■□□□□ 0.15
CDH4P55283 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16■□□□□ 0.15
CDH4P55283 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 AC084364.1-201ENST00000551967 1556 ntBASIC16■□□□□ 0.15
CDH4P55283 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH4P55283 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16■□□□□ 0.15
CDH4P55283 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH4P55283 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH4P55283 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH4P55283 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH4P55283 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH4P55283 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.99■□□□□ 0.15
CDH4P55283 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CDH4P55283 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH4P55283 AC133539.2-201ENST00000604757 467 ntBASIC15.99■□□□□ 0.15
CDH4P55283 WFDC1-204ENST00000613603 549 ntBASIC15.99■□□□□ 0.15
CDH4P55283 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 CU639417.3-201ENST00000624240 1404 ntBASIC15.99■□□□□ 0.15
CDH4P55283 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH4P55283 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDH4P55283 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 INTS4P2-202ENST00000614726 2019 ntBASIC15.99■□□□□ 0.15
CDH4P55283 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH4P55283 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH4P55283 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms