Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 ME2P1-201ENST00000426028 1970 ntBASIC16.15■□□□□ 0.18
ATXN3P54252 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.15■□□□□ 0.18
ATXN3P54252 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.15■□□□□ 0.18
ATXN3P54252 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 TTTY23B-201ENST00000442790 549 ntBASIC16.15■□□□□ 0.18
ATXN3P54252 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.15■□□□□ 0.18
ATXN3P54252 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.15■□□□□ 0.18
ATXN3P54252 ZNF890P-202ENST00000530367 1156 ntBASIC16.15■□□□□ 0.18
ATXN3P54252 AC055876.2-201ENST00000531834 546 ntBASIC16.15■□□□□ 0.18
ATXN3P54252 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.15■□□□□ 0.18
ATXN3P54252 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.15■□□□□ 0.18
ATXN3P54252 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.15■□□□□ 0.18
ATXN3P54252 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 LINC02228-204ENST00000642115 2962 ntBASIC16.15■□□□□ 0.18
ATXN3P54252 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ATXN3P54252 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.15■□□□□ 0.18
ATXN3P54252 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.15■□□□□ 0.18
ATXN3P54252 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.15■□□□□ 0.18
ATXN3P54252 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ATXN3P54252 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.14■□□□□ 0.18
ATXN3P54252 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ATXN3P54252 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.14■□□□□ 0.17
ATXN3P54252 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.14■□□□□ 0.17
ATXN3P54252 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATXN3P54252 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATXN3P54252 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATXN3P54252 AL080243.2-201ENST00000418783 582 ntBASIC16.14■□□□□ 0.17
ATXN3P54252 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 MEP1AP4-201ENST00000423244 1087 ntBASIC16.14■□□□□ 0.17
ATXN3P54252 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 AC234783.1-201ENST00000441761 496 ntBASIC16.14■□□□□ 0.17
ATXN3P54252 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.14■□□□□ 0.17
ATXN3P54252 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ATXN3P54252 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.14■□□□□ 0.17
ATXN3P54252 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ATXN3P54252 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.14■□□□□ 0.17
ATXN3P54252 CHCHD2P3-201ENST00000603038 451 ntBASIC16.14■□□□□ 0.17
ATXN3P54252 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ATXN3P54252 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATXN3P54252 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 AC073347.1-201ENST00000421633 2643 ntBASIC16.14■□□□□ 0.17
ATXN3P54252 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATXN3P54252 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.14■□□□□ 0.17
ATXN3P54252 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATXN3P54252 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms