Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LBX1P52954 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LBX1P52954 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LBX1P52954 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LBX1P52954 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LBX1P52954 AC020931.1-201ENST00000589622 1346 ntBASIC17.31■□□□□ 0.36
LBX1P52954 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LBX1P52954 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.31■□□□□ 0.36
LBX1P52954 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.31■□□□□ 0.36
LBX1P52954 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.31■□□□□ 0.36
LBX1P52954 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.31■□□□□ 0.36
LBX1P52954 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.31■□□□□ 0.36
LBX1P52954 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.31■□□□□ 0.36
LBX1P52954 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.31■□□□□ 0.36
LBX1P52954 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 AP000974.1-201ENST00000623909 2387 ntBASIC17.31■□□□□ 0.36
LBX1P52954 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.31■□□□□ 0.36
LBX1P52954 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.31■□□□□ 0.36
LBX1P52954 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LBX1P52954 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.3■□□□□ 0.36
LBX1P52954 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.3■□□□□ 0.36
LBX1P52954 AL158070.2-201ENST00000623713 1621 ntBASIC17.3■□□□□ 0.36
LBX1P52954 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.3■□□□□ 0.36
LBX1P52954 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.3■□□□□ 0.36
LBX1P52954 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.3■□□□□ 0.36
LBX1P52954 JPT2-203ENST00000382711 894 ntTSL 4 BASIC17.3■□□□□ 0.36
LBX1P52954 MIR566-201ENST00000385187 94 ntBASIC17.3■□□□□ 0.36
LBX1P52954 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.3■□□□□ 0.36
LBX1P52954 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.3■□□□□ 0.36
LBX1P52954 KLF2P1-201ENST00000447438 1042 ntBASIC17.3■□□□□ 0.36
LBX1P52954 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 AC022616.1-201ENST00000518688 554 ntBASIC17.3■□□□□ 0.36
LBX1P52954 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.3■□□□□ 0.36
LBX1P52954 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LBX1P52954 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.3■□□□□ 0.36
LBX1P52954 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.3■□□□□ 0.36
LBX1P52954 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.3■□□□□ 0.36
LBX1P52954 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LBX1P52954 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LBX1P52954 AC093503.3-201ENST00000624917 2352 ntBASIC17.3■□□□□ 0.36
LBX1P52954 AC015909.3-201ENST00000572855 1794 ntBASIC17.3■□□□□ 0.36
LBX1P52954 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LBX1P52954 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
LBX1P52954 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
LBX1P52954 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LBX1P52954 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.29■□□□□ 0.36
LBX1P52954 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.29■□□□□ 0.36
LBX1P52954 AL645937.2-201ENST00000396808 931 ntBASIC17.29■□□□□ 0.36
LBX1P52954 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.29■□□□□ 0.36
LBX1P52954 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.29■□□□□ 0.36
LBX1P52954 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms