Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.88□□□□□ -0.19
CX3CR1P49238 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CX3CR1P49238 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 AL353705.2-201ENST00000428243 662 ntBASIC13.88□□□□□ -0.19
CX3CR1P49238 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.88□□□□□ -0.19
CX3CR1P49238 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.88□□□□□ -0.19
CX3CR1P49238 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.88□□□□□ -0.19
CX3CR1P49238 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CX3CR1P49238 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 MIR4469-201ENST00000583919 79 ntBASIC13.88□□□□□ -0.19
CX3CR1P49238 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.88□□□□□ -0.19
CX3CR1P49238 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.88□□□□□ -0.19
CX3CR1P49238 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.88□□□□□ -0.19
CX3CR1P49238 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.88□□□□□ -0.19
CX3CR1P49238 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CX3CR1P49238 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.87□□□□□ -0.19
CX3CR1P49238 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
CX3CR1P49238 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.87□□□□□ -0.19
CX3CR1P49238 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.87□□□□□ -0.19
CX3CR1P49238 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.87□□□□□ -0.19
CX3CR1P49238 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 PHKG1P2-201ENST00000457537 863 ntBASIC13.87□□□□□ -0.19
CX3CR1P49238 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.87□□□□□ -0.19
CX3CR1P49238 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 SBF1P1-201ENST00000444527 5631 ntBASIC13.87□□□□□ -0.19
CX3CR1P49238 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.87□□□□□ -0.19
CX3CR1P49238 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CX3CR1P49238 AL109954.1-202ENST00000564051 2148 ntBASIC13.87□□□□□ -0.19
CX3CR1P49238 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CX3CR1P49238 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.87□□□□□ -0.19
CX3CR1P49238 MYO15B-237ENST00000642007 4893 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 AC138035.3-201ENST00000622706 2791 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 AC127383.1-201ENST00000444697 1800 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms