Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COPB2P35606 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPB2P35606 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPB2P35606 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPB2P35606 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COPB2P35606 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPB2P35606 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
COPB2P35606 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPB2P35606 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPB2P35606 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.92■□□□□ 0.46
COPB2P35606 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.91■□□□□ 0.46
COPB2P35606 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COPB2P35606 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.91■□□□□ 0.46
COPB2P35606 AC106760.1-201ENST00000508690 800 ntBASIC17.91■□□□□ 0.46
COPB2P35606 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.91■□□□□ 0.46
COPB2P35606 RN7SL219P-201ENST00000582872 296 ntBASIC17.91■□□□□ 0.46
COPB2P35606 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.91■□□□□ 0.46
COPB2P35606 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COPB2P35606 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
COPB2P35606 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPB2P35606 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
COPB2P35606 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPB2P35606 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 BRWD1P1-201ENST00000401091 371 ntBASIC17.9■□□□□ 0.46
COPB2P35606 MIR1908-201ENST00000410394 80 ntBASIC17.9■□□□□ 0.46
COPB2P35606 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.9■□□□□ 0.46
COPB2P35606 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.9■□□□□ 0.46
COPB2P35606 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.9■□□□□ 0.46
COPB2P35606 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.9■□□□□ 0.46
COPB2P35606 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.9■□□□□ 0.46
COPB2P35606 AP005019.2-201ENST00000615104 511 ntBASIC17.9■□□□□ 0.46
COPB2P35606 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.9■□□□□ 0.46
COPB2P35606 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.9■□□□□ 0.46
COPB2P35606 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPB2P35606 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPB2P35606 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPB2P35606 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPB2P35606 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPB2P35606 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
COPB2P35606 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.89■□□□□ 0.45
COPB2P35606 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
COPB2P35606 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.89■□□□□ 0.45
COPB2P35606 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.89■□□□□ 0.45
COPB2P35606 GAPDHP40-201ENST00000505218 1006 ntBASIC17.89■□□□□ 0.45
COPB2P35606 KRT18P25-201ENST00000508931 1278 ntBASIC17.89■□□□□ 0.45
COPB2P35606 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.89■□□□□ 0.45
COPB2P35606 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.89■□□□□ 0.45
COPB2P35606 MIR6869-201ENST00000619434 62 ntBASIC17.89■□□□□ 0.45
COPB2P35606 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.89■□□□□ 0.45
COPB2P35606 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COPB2P35606 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.89■□□□□ 0.45
COPB2P35606 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.89■□□□□ 0.45
COPB2P35606 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.89■□□□□ 0.45
COPB2P35606 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPB2P35606 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms