Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPDP35247 AC092127.1-201ENST00000567093 3455 ntBASIC14.28□□□□□ -0.12
SFTPDP35247 AC009407.1-201ENST00000568958 598 ntBASIC14.28□□□□□ -0.12
SFTPDP35247 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPDP35247 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.28□□□□□ -0.12
SFTPDP35247 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SFTPDP35247 AJ011932.1-201ENST00000621707 465 ntBASIC14.28□□□□□ -0.12
SFTPDP35247 AL607033.1-201ENST00000623900 1599 ntBASIC14.28□□□□□ -0.12
SFTPDP35247 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPDP35247 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPDP35247 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SFTPDP35247 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPDP35247 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SFTPDP35247 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SFTPDP35247 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.27□□□□□ -0.12
SFTPDP35247 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SFTPDP35247 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SFTPDP35247 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
SFTPDP35247 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.12
SFTPDP35247 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SFTPDP35247 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.27□□□□□ -0.12
SFTPDP35247 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SFTPDP35247 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPDP35247 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPDP35247 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPDP35247 MRPS18AP1-201ENST00000414458 589 ntBASIC14.27□□□□□ -0.13
SFTPDP35247 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPDP35247 FAM8A3P-201ENST00000427218 844 ntBASIC14.27□□□□□ -0.13
SFTPDP35247 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPDP35247 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPDP35247 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SFTPDP35247 MIR4313-201ENST00000580760 101 ntBASIC14.27□□□□□ -0.13
SFTPDP35247 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPDP35247 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.27□□□□□ -0.13
SFTPDP35247 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.27□□□□□ -0.13
SFTPDP35247 AL096865.1-201ENST00000606796 927 ntBASIC14.27□□□□□ -0.13
SFTPDP35247 AC074044.1-201ENST00000609673 707 ntBASIC14.27□□□□□ -0.13
SFTPDP35247 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPDP35247 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPDP35247 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPDP35247 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.27□□□□□ -0.13
SFTPDP35247 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.27□□□□□ -0.13
SFTPDP35247 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SFTPDP35247 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SFTPDP35247 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.26□□□□□ -0.13
SFTPDP35247 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SFTPDP35247 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SFTPDP35247 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.26□□□□□ -0.13
SFTPDP35247 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.26□□□□□ -0.13
SFTPDP35247 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.26□□□□□ -0.13
SFTPDP35247 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.26□□□□□ -0.13
SFTPDP35247 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.26□□□□□ -0.13
SFTPDP35247 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.26□□□□□ -0.13
SFTPDP35247 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.26□□□□□ -0.13
SFTPDP35247 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SFTPDP35247 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.26□□□□□ -0.13
SFTPDP35247 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.26□□□□□ -0.13
SFTPDP35247 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.26□□□□□ -0.13
SFTPDP35247 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms