Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.6■□□□□ 0.41
CIITAP33076 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CIITAP33076 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.6■□□□□ 0.41
CIITAP33076 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.6■□□□□ 0.41
CIITAP33076 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.6■□□□□ 0.41
CIITAP33076 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.6■□□□□ 0.41
CIITAP33076 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CIITAP33076 RPSAP52-203ENST00000622976 1023 ntBASIC17.6■□□□□ 0.41
CIITAP33076 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.6■□□□□ 0.41
CIITAP33076 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.6■□□□□ 0.41
CIITAP33076 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.6■□□□□ 0.41
CIITAP33076 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CIITAP33076 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIITAP33076 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CIITAP33076 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CIITAP33076 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CIITAP33076 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.59■□□□□ 0.41
CIITAP33076 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CIITAP33076 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.59■□□□□ 0.41
CIITAP33076 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.59■□□□□ 0.41
CIITAP33076 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 KRT8P22-201ENST00000562317 1415 ntBASIC17.59■□□□□ 0.41
CIITAP33076 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CIITAP33076 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.59■□□□□ 0.41
CIITAP33076 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.59■□□□□ 0.41
CIITAP33076 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CIITAP33076 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 RN7SL752P-201ENST00000463779 287 ntBASIC17.59■□□□□ 0.41
CIITAP33076 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.59■□□□□ 0.41
CIITAP33076 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.59■□□□□ 0.41
CIITAP33076 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.59■□□□□ 0.41
CIITAP33076 AC093813.1-201ENST00000605066 256 ntBASIC17.59■□□□□ 0.41
CIITAP33076 AC107373.2-201ENST00000607735 490 ntBASIC17.59■□□□□ 0.41
CIITAP33076 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CIITAP33076 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CIITAP33076 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIITAP33076 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CIITAP33076 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CIITAP33076 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CIITAP33076 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.58■□□□□ 0.41
CIITAP33076 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CIITAP33076 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CIITAP33076 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.58■□□□□ 0.41
CIITAP33076 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.58■□□□□ 0.41
CIITAP33076 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CIITAP33076 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.58■□□□□ 0.41
CIITAP33076 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CIITAP33076 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CIITAP33076 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.58■□□□□ 0.4
CIITAP33076 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CIITAP33076 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CIITAP33076 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CIITAP33076 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.58■□□□□ 0.4
CIITAP33076 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CIITAP33076 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CIITAP33076 C1QBPP1-201ENST00000400117 770 ntBASIC17.58■□□□□ 0.4
CIITAP33076 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.58■□□□□ 0.4
CIITAP33076 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.58■□□□□ 0.4
CIITAP33076 INE1-201ENST00000456273 945 ntBASIC17.58■□□□□ 0.4
CIITAP33076 RN7SL837P-201ENST00000463010 287 ntBASIC17.58■□□□□ 0.4
CIITAP33076 AC011495.1-201ENST00000498085 584 ntBASIC17.58■□□□□ 0.4
CIITAP33076 ENPP7P5-201ENST00000541031 1031 ntBASIC17.58■□□□□ 0.4
CIITAP33076 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.58■□□□□ 0.4
CIITAP33076 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.58■□□□□ 0.4
CIITAP33076 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.58■□□□□ 0.4
CIITAP33076 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.58■□□□□ 0.4
CIITAP33076 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.58■□□□□ 0.4
CIITAP33076 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms