Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL512384.1-201ENST00000406683 331 ntBASIC13.29□□□□□ -0.28
COL8A2P25067 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.29□□□□□ -0.28
COL8A2P25067 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 GIMAP3P-201ENST00000495150 836 ntBASIC13.29□□□□□ -0.28
COL8A2P25067 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 AC092552.1-201ENST00000547243 906 ntBASIC13.29□□□□□ -0.28
COL8A2P25067 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.29□□□□□ -0.28
COL8A2P25067 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.29□□□□□ -0.28
COL8A2P25067 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.29□□□□□ -0.28
COL8A2P25067 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 AL391069.4-201ENST00000609583 481 ntBASIC13.29□□□□□ -0.28
COL8A2P25067 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 AC011477.6-201ENST00000604980 1927 ntBASIC13.29□□□□□ -0.28
COL8A2P25067 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.29□□□□□ -0.28
COL8A2P25067 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COL8A2P25067 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
COL8A2P25067 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.28□□□□□ -0.28
COL8A2P25067 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.28□□□□□ -0.28
COL8A2P25067 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 RN7SL837P-201ENST00000463010 287 ntBASIC13.28□□□□□ -0.28
COL8A2P25067 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
COL8A2P25067 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
COL8A2P25067 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 AL033527.5-201ENST00000641382 801 ntBASIC13.28□□□□□ -0.28
COL8A2P25067 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
COL8A2P25067 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 AP003680.1-201ENST00000598970 3660 ntBASIC13.28□□□□□ -0.28
COL8A2P25067 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.28□□□□□ -0.28
COL8A2P25067 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.28□□□□□ -0.28
COL8A2P25067 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
COL8A2P25067 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.27□□□□□ -0.28
COL8A2P25067 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
COL8A2P25067 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
COL8A2P25067 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.27□□□□□ -0.28
COL8A2P25067 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
COL8A2P25067 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms