Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX1P22670 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX1P22670 AC136621.1-201ENST00000624017 2304 ntBASIC17.13■□□□□ 0.33
RFX1P22670 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX1P22670 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX1P22670 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
RFX1P22670 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX1P22670 AP006294.1-201ENST00000415407 339 ntBASIC17.12■□□□□ 0.33
RFX1P22670 AC136604.1-201ENST00000418535 575 ntBASIC17.12■□□□□ 0.33
RFX1P22670 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.12■□□□□ 0.33
RFX1P22670 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.12■□□□□ 0.33
RFX1P22670 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFX1P22670 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.12■□□□□ 0.33
RFX1P22670 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 HNRNPUP1-201ENST00000554987 333 ntBASIC17.12■□□□□ 0.33
RFX1P22670 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX1P22670 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RFX1P22670 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFX1P22670 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 AC013268.4-201ENST00000637413 2228 ntBASIC17.12■□□□□ 0.33
RFX1P22670 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX1P22670 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX1P22670 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RFX1P22670 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 AP003680.1-201ENST00000598970 3660 ntBASIC17.11■□□□□ 0.33
RFX1P22670 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX1P22670 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFX1P22670 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX1P22670 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX1P22670 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX1P22670 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFX1P22670 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 SPDYE17-201ENST00000412399 783 ntBASIC17.11■□□□□ 0.33
RFX1P22670 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX1P22670 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 TSSK5P-201ENST00000423978 907 ntBASIC17.11■□□□□ 0.33
RFX1P22670 AL353779.1-201ENST00000434793 351 ntBASIC17.11■□□□□ 0.33
RFX1P22670 U91328.1-201ENST00000437528 223 ntBASIC17.11■□□□□ 0.33
RFX1P22670 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 MTND6P24-201ENST00000440466 518 ntBASIC17.11■□□□□ 0.33
RFX1P22670 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 RN7SL752P-201ENST00000463779 287 ntBASIC17.11■□□□□ 0.33
RFX1P22670 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 AC011495.1-201ENST00000498085 584 ntBASIC17.11■□□□□ 0.33
RFX1P22670 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 AC105021.1-202ENST00000570572 669 ntBASIC17.11■□□□□ 0.33
RFX1P22670 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX1P22670 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX1P22670 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX1P22670 AL035456.1-201ENST00000456064 1369 ntBASIC17.11■□□□□ 0.33
RFX1P22670 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms