Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.86□□□□□ -0.19
ATF1P18846 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.86□□□□□ -0.19
ATF1P18846 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ATF1P18846 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.86□□□□□ -0.19
ATF1P18846 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.86□□□□□ -0.19
ATF1P18846 AP002472.1-201ENST00000577490 586 ntBASIC13.86□□□□□ -0.19
ATF1P18846 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.86□□□□□ -0.19
ATF1P18846 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.86□□□□□ -0.19
ATF1P18846 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.86□□□□□ -0.19
ATF1P18846 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 AC126755.1-201ENST00000525846 6405 ntBASIC13.86□□□□□ -0.19
ATF1P18846 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.86□□□□□ -0.19
ATF1P18846 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATF1P18846 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.85□□□□□ -0.19
ATF1P18846 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.85□□□□□ -0.19
ATF1P18846 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.85□□□□□ -0.19
ATF1P18846 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.85□□□□□ -0.19
ATF1P18846 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.85□□□□□ -0.19
ATF1P18846 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 RPL13AP23-201ENST00000480739 586 ntBASIC13.85□□□□□ -0.19
ATF1P18846 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.85□□□□□ -0.19
ATF1P18846 AC098859.1-201ENST00000502915 1238 ntBASIC13.85□□□□□ -0.19
ATF1P18846 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.85□□□□□ -0.19
ATF1P18846 AC112191.1-201ENST00000523689 701 ntBASIC13.85□□□□□ -0.19
ATF1P18846 PDPK2P-202ENST00000562415 1191 ntBASIC13.85□□□□□ -0.19
ATF1P18846 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.85□□□□□ -0.19
ATF1P18846 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.85□□□□□ -0.19
ATF1P18846 AC073389.1-201ENST00000595595 795 ntBASIC13.85□□□□□ -0.19
ATF1P18846 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
ATF1P18846 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATF1P18846 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.84□□□□□ -0.19
ATF1P18846 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms