Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 AP000344.2-201ENST00000512987 629 ntBASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 AC004835.2-201ENST00000603762 682 ntBASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 TMBIM7P-203ENST00000641617 1718 ntBASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
IGHV3-43DP0DP04 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 AC023824.1-201ENST00000562945 2975 ntBASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 AC138035.3-201ENST00000622706 2791 ntBASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.11□□□□□ -0.31
IGHV3-43DP0DP04 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms