Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 TSPY26P-202ENST00000565928 3884 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 AC132872.4-202ENST00000622924 2756 ntBASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 RPS2P32-201ENST00000439199 892 ntBASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 CU634019.7-201ENST00000624153 1185 ntBASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 FP236241.2-201ENST00000624906 1185 ntBASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 AC092364.2-201ENST00000596710 2692 ntBASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40ALP0C0E4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC134915.1-201ENST00000426461 574 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 HLA-V-201ENST00000429037 534 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC233724.13-201ENST00000598383 410 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC097359.3-201ENST00000603982 1210 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms