Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.41■□□□□ 0.38
TPM1P09493 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 AC126365.1-201ENST00000578585 1514 ntBASIC17.41■□□□□ 0.38
TPM1P09493 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 AC126335.2-201ENST00000623362 4637 ntBASIC17.41■□□□□ 0.38
TPM1P09493 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TPM1P09493 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.4■□□□□ 0.38
TPM1P09493 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TPM1P09493 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM1P09493 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.4■□□□□ 0.38
TPM1P09493 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TPM1P09493 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TPM1P09493 IGLL3P-201ENST00000412472 434 ntBASIC17.4■□□□□ 0.38
TPM1P09493 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM1P09493 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM1P09493 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM1P09493 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM1P09493 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM1P09493 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.4■□□□□ 0.38
TPM1P09493 AL161645.1-201ENST00000622716 1255 ntBASIC17.4■□□□□ 0.38
TPM1P09493 AC010507.1-201ENST00000633895 436 ntBASIC17.4■□□□□ 0.38
TPM1P09493 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TPM1P09493 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM1P09493 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM1P09493 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM1P09493 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TPM1P09493 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TPM1P09493 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TPM1P09493 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM1P09493 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TPM1P09493 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 AL390755.1-201ENST00000623716 2027 ntBASIC17.39■□□□□ 0.37
TPM1P09493 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TPM1P09493 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TPM1P09493 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TPM1P09493 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.39■□□□□ 0.37
TPM1P09493 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM1P09493 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TPM1P09493 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM1P09493 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM1P09493 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM1P09493 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.38■□□□□ 0.37
TPM1P09493 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TPM1P09493 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 AC091951.1-201ENST00000512854 2465 ntBASIC17.38■□□□□ 0.37
TPM1P09493 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM1P09493 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TPM1P09493 RHOQP3-201ENST00000437982 621 ntBASIC17.38■□□□□ 0.37
TPM1P09493 HCG4B-203ENST00000450128 991 ntBASIC17.38■□□□□ 0.37
TPM1P09493 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.38■□□□□ 0.37
TPM1P09493 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
TPM1P09493 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms