Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 ALG1L8P-201ENST00000533887 760 ntBASIC15.3■□□□□ 0.04
KRT6AP02538 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 FAM45BP-202ENST00000592932 1624 ntBASIC15.3■□□□□ 0.04
KRT6AP02538 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.3■□□□□ 0.04
KRT6AP02538 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT6AP02538 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.3■□□□□ 0.04
KRT6AP02538 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 AP002414.2-201ENST00000591780 3365 ntBASIC15.3■□□□□ 0.04
KRT6AP02538 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT6AP02538 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
KRT6AP02538 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT6AP02538 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT6AP02538 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT6AP02538 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT6AP02538 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT6AP02538 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT6AP02538 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
KRT6AP02538 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT6AP02538 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT6AP02538 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT6AP02538 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT6AP02538 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
KRT6AP02538 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KRT6AP02538 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT6AP02538 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.28■□□□□ 0.04
KRT6AP02538 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT6AP02538 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.28■□□□□ 0.04
KRT6AP02538 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 AC018529.1-201ENST00000613063 361 ntBASIC15.28■□□□□ 0.04
KRT6AP02538 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.28■□□□□ 0.04
KRT6AP02538 AL513210.1-201ENST00000629608 234 ntBASIC15.28■□□□□ 0.04
KRT6AP02538 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT6AP02538 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRT6AP02538 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT6AP02538 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms