Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 PDIA3P1-201ENST00000471856 1510 ntBASIC17.59■□□□□ 0.41
GGPS1O95749 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 AL133267.1-201ENST00000398220 340 ntBASIC17.59■□□□□ 0.41
GGPS1O95749 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.59■□□□□ 0.41
GGPS1O95749 HLA-V-201ENST00000429037 534 ntBASIC17.59■□□□□ 0.41
GGPS1O95749 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.59■□□□□ 0.41
GGPS1O95749 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
GGPS1O95749 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.59■□□□□ 0.41
GGPS1O95749 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 AC005252.2-201ENST00000624630 1141 ntBASIC17.59■□□□□ 0.41
GGPS1O95749 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.59■□□□□ 0.41
GGPS1O95749 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GGPS1O95749 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.58■□□□□ 0.41
GGPS1O95749 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GGPS1O95749 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
GGPS1O95749 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.58■□□□□ 0.41
GGPS1O95749 DRD5P1-201ENST00000456605 1438 ntBASIC17.58■□□□□ 0.41
GGPS1O95749 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GGPS1O95749 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.58■□□□□ 0.4
GGPS1O95749 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.58■□□□□ 0.4
GGPS1O95749 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
GGPS1O95749 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.58■□□□□ 0.4
GGPS1O95749 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
GGPS1O95749 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.58■□□□□ 0.4
GGPS1O95749 AC026410.3-201ENST00000514280 936 ntBASIC17.58■□□□□ 0.4
GGPS1O95749 AP001889.1-201ENST00000525414 633 ntBASIC17.58■□□□□ 0.4
GGPS1O95749 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.58■□□□□ 0.4
GGPS1O95749 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
GGPS1O95749 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GGPS1O95749 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GGPS1O95749 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.58■□□□□ 0.4
GGPS1O95749 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GGPS1O95749 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 LINC02447-202ENST00000501888 2146 ntBASIC17.57■□□□□ 0.4
GGPS1O95749 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
GGPS1O95749 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GGPS1O95749 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GGPS1O95749 CTBP2P5-201ENST00000454986 1264 ntBASIC17.57■□□□□ 0.4
GGPS1O95749 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
GGPS1O95749 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
GGPS1O95749 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.57■□□□□ 0.4
GGPS1O95749 AC009486.1-201ENST00000569860 813 ntBASIC17.57■□□□□ 0.4
GGPS1O95749 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.57■□□□□ 0.4
GGPS1O95749 AC015910.1-201ENST00000579400 975 ntBASIC17.57■□□□□ 0.4
GGPS1O95749 AC107373.2-201ENST00000607735 490 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms