Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 AL845331.1-201ENST00000424978 1190 ntBASIC13.73□□□□□ -0.21
UPK1BO75841 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
UPK1BO75841 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 AL049637.2-201ENST00000641778 930 ntBASIC13.73□□□□□ -0.21
UPK1BO75841 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
UPK1BO75841 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
UPK1BO75841 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1BO75841 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1BO75841 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 AC019294.4-201ENST00000561777 2905 ntBASIC13.72□□□□□ -0.21
UPK1BO75841 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1BO75841 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 AL359075.1-203ENST00000462729 1002 ntBASIC13.72□□□□□ -0.21
UPK1BO75841 RN7SL606P-201ENST00000472779 293 ntBASIC13.72□□□□□ -0.21
UPK1BO75841 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.72□□□□□ -0.21
UPK1BO75841 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
UPK1BO75841 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK1BO75841 RNF126P1-202ENST00000569893 925 ntBASIC13.72□□□□□ -0.21
UPK1BO75841 MIR4313-201ENST00000580760 101 ntBASIC13.72□□□□□ -0.21
UPK1BO75841 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1BO75841 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK1BO75841 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK1BO75841 AL359736.2-201ENST00000621992 437 ntBASIC13.72□□□□□ -0.21
UPK1BO75841 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
UPK1BO75841 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1BO75841 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK1BO75841 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1BO75841 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1BO75841 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1BO75841 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1BO75841 KRT18P22-201ENST00000402024 1347 ntBASIC13.71□□□□□ -0.21
UPK1BO75841 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.71□□□□□ -0.21
UPK1BO75841 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1BO75841 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1BO75841 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK1BO75841 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK1BO75841 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1BO75841 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK1BO75841 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1BO75841 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 AL365330.1-201ENST00000607459 531 ntBASIC13.71□□□□□ -0.21
UPK1BO75841 AC141257.4-201ENST00000634557 245 ntBASIC13.71□□□□□ -0.21
UPK1BO75841 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms