Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRIM3O75382 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRIM3O75382 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 AL590560.3-201ENST00000623350 461 ntBASIC14.75□□□□□ -0.05
TRIM3O75382 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIM3O75382 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRIM3O75382 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRIM3O75382 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIM3O75382 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRIM3O75382 RPL37AP1-201ENST00000412502 279 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIM3O75382 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 TSSK5P-201ENST00000423978 907 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 AC245100.5-201ENST00000452108 331 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 AL139010.1-201ENST00000454878 894 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 INGX-202ENST00000489074 768 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM3O75382 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIM3O75382 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 TEX28P1-201ENST00000613479 1221 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 TEX28P2-201ENST00000617764 1221 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 AJ011932.1-201ENST00000621707 465 ntBASIC14.74□□□□□ -0.05
TRIM3O75382 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRIM3O75382 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIM3O75382 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIM3O75382 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRIM3O75382 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM3O75382 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM3O75382 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM3O75382 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM3O75382 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM3O75382 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 CICP13-201ENST00000422015 2789 ntBASIC14.73□□□□□ -0.05
TRIM3O75382 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM3O75382 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM3O75382 MIR648-201ENST00000385046 94 ntBASIC14.73□□□□□ -0.05
TRIM3O75382 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM3O75382 SPDYE17-201ENST00000412399 783 ntBASIC14.73□□□□□ -0.05
TRIM3O75382 AL080243.2-201ENST00000418783 582 ntBASIC14.73□□□□□ -0.05
TRIM3O75382 FAM8A3P-201ENST00000427218 844 ntBASIC14.73□□□□□ -0.05
TRIM3O75382 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM3O75382 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM3O75382 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM3O75382 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms