Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CUBNO60494 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CUBNO60494 AC012362.1-201ENST00000434906 739 ntBASIC12.36□□□□□ -0.43
CUBNO60494 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CUBNO60494 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.36□□□□□ -0.43
CUBNO60494 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.36□□□□□ -0.43
CUBNO60494 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.36□□□□□ -0.43
CUBNO60494 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.36□□□□□ -0.43
CUBNO60494 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CUBNO60494 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.36□□□□□ -0.43
CUBNO60494 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CUBNO60494 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CUBNO60494 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CUBNO60494 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.35□□□□□ -0.43
CUBNO60494 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CUBNO60494 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 AC013355.1-201ENST00000562625 723 ntBASIC12.35□□□□□ -0.43
CUBNO60494 COX6A1P2-201ENST00000620597 330 ntBASIC12.35□□□□□ -0.43
CUBNO60494 AL157414.3-201ENST00000624276 1954 ntBASIC12.35□□□□□ -0.43
CUBNO60494 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.35□□□□□ -0.43
CUBNO60494 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.35□□□□□ -0.43
CUBNO60494 KRT18P25-201ENST00000508931 1278 ntBASIC12.35□□□□□ -0.43
CUBNO60494 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.35□□□□□ -0.43
CUBNO60494 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.35□□□□□ -0.43
CUBNO60494 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 DPM3-202ENST00000368399 517 ntBASIC12.35□□□□□ -0.43
CUBNO60494 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 AC079178.1-201ENST00000420915 656 ntBASIC12.35□□□□□ -0.43
CUBNO60494 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.35□□□□□ -0.43
CUBNO60494 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CUBNO60494 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.35□□□□□ -0.43
CUBNO60494 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.35□□□□□ -0.43
CUBNO60494 AC127024.7-201ENST00000625101 200 ntBASIC12.35□□□□□ -0.43
CUBNO60494 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.35□□□□□ -0.43
CUBNO60494 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CUBNO60494 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.34□□□□□ -0.43
CUBNO60494 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.34□□□□□ -0.43
CUBNO60494 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.34□□□□□ -0.43
CUBNO60494 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.34□□□□□ -0.43
CUBNO60494 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.34□□□□□ -0.43
CUBNO60494 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CUBNO60494 AL138799.1-201ENST00000448213 1675 ntBASIC12.34□□□□□ -0.43
CUBNO60494 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 AC097065.1-201ENST00000425737 517 ntBASIC12.34□□□□□ -0.43
CUBNO60494 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.34□□□□□ -0.43
CUBNO60494 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.34□□□□□ -0.43
CUBNO60494 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.34□□□□□ -0.43
CUBNO60494 AC132192.2-201ENST00000596206 1147 ntBASIC12.34□□□□□ -0.43
CUBNO60494 AC007663.3-201ENST00000609632 465 ntBASIC12.34□□□□□ -0.43
CUBNO60494 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.34□□□□□ -0.43
CUBNO60494 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CUBNO60494 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CUBNO60494 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.34□□□□□ -0.43
CUBNO60494 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.34□□□□□ -0.43
CUBNO60494 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms