Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCA5O60264 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCA5O60264 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCA5O60264 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SMARCA5O60264 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.38■□□□□ 0.69
SMARCA5O60264 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.38■□□□□ 0.69
SMARCA5O60264 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.38■□□□□ 0.69
SMARCA5O60264 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SMARCA5O60264 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCA5O60264 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 AC022144.1-201ENST00000602255 1580 ntBASIC19.38■□□□□ 0.69
SMARCA5O60264 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCA5O60264 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
SMARCA5O60264 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCA5O60264 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCA5O60264 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCA5O60264 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCA5O60264 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCA5O60264 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCA5O60264 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCA5O60264 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCA5O60264 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCA5O60264 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AC006486.2-201ENST00000624246 2199 ntBASIC19.36■□□□□ 0.69
SMARCA5O60264 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SMARCA5O60264 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCA5O60264 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCA5O60264 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AC114501.2-201ENST00000439631 535 ntBASIC19.36■□□□□ 0.69
SMARCA5O60264 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCA5O60264 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCA5O60264 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.36■□□□□ 0.69
SMARCA5O60264 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCA5O60264 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCA5O60264 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCA5O60264 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCA5O60264 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms