Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
RIPK2O43353 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.99■□□□□ 0.15
RIPK2O43353 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RIPK2O43353 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.99■□□□□ 0.15
RIPK2O43353 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.99■□□□□ 0.15
RIPK2O43353 EMBP1-201ENST00000458200 901 ntBASIC15.99■□□□□ 0.15
RIPK2O43353 AC105233.2-201ENST00000523697 349 ntBASIC15.99■□□□□ 0.15
RIPK2O43353 AF228730.5-201ENST00000530288 346 ntBASIC15.99■□□□□ 0.15
RIPK2O43353 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.99■□□□□ 0.15
RIPK2O43353 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.99■□□□□ 0.15
RIPK2O43353 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 CYP4F24P-201ENST00000586049 1580 ntBASIC15.99■□□□□ 0.15
RIPK2O43353 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RIPK2O43353 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
RIPK2O43353 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RIPK2O43353 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.99■□□□□ 0.15
RIPK2O43353 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.98■□□□□ 0.15
RIPK2O43353 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.98■□□□□ 0.15
RIPK2O43353 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.98■□□□□ 0.15
RIPK2O43353 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.98■□□□□ 0.15
RIPK2O43353 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 CICP11-201ENST00000434745 2827 ntBASIC15.98■□□□□ 0.15
RIPK2O43353 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.98■□□□□ 0.15
RIPK2O43353 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.98■□□□□ 0.15
RIPK2O43353 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RIPK2O43353 BCAR1-209ENST00000546196 1340 ntBASIC15.97■□□□□ 0.15
RIPK2O43353 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms