Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 PIN1P1-201ENST00000412108 996 ntBASIC15.07■□□□□ 0
PCDH17O14917 MRPS18AP1-201ENST00000414458 589 ntBASIC15.07■□□□□ 0
PCDH17O14917 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.07■□□□□ 0
PCDH17O14917 GAPDHP21-201ENST00000450301 1010 ntBASIC15.07■□□□□ 0
PCDH17O14917 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.07■□□□□ 0
PCDH17O14917 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.07■□□□□ 0
PCDH17O14917 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH17O14917 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.07■□□□□ 0
PCDH17O14917 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
PCDH17O14917 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDH17O14917 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.06■□□□□ 0
PCDH17O14917 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.06■□□□□ 0
PCDH17O14917 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.06■□□□□ 0
PCDH17O14917 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PCDH17O14917 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.06■□□□□ 0
PCDH17O14917 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.06■□□□□ 0
PCDH17O14917 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH17O14917 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PCDH17O14917 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.05■□□□□ 0
PCDH17O14917 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.05■□□□□ 0
PCDH17O14917 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.05■□□□□ 0
PCDH17O14917 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH17O14917 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDH17O14917 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDH17O14917 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
PCDH17O14917 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDH17O14917 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms