Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.33■□□□□ 0.04
C4orf47A7E2U8 AL603756.1-201ENST00000606511 2163 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 CHMP4BP1-201ENST00000556017 588 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 MIR3619-201ENST00000579667 83 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 NDUFV2P1-201ENST00000596415 907 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AC093813.1-201ENST00000605066 256 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AL096828.3-201ENST00000615354 462 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 CROCCP1-201ENST00000426910 5675 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 NFIC-211ENST00000641145 8399 ntBASIC15.32■□□□□ 0.04
C4orf47A7E2U8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C4orf47A7E2U8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 AC091046.1-201ENST00000331871 207 ntBASIC15.31■□□□□ 0.04
C4orf47A7E2U8 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
C4orf47A7E2U8 TMEM198B-204ENST00000484016 896 ntBASIC15.31■□□□□ 0.04
C4orf47A7E2U8 AC026410.3-201ENST00000514280 936 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms