Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-4A0A0C4DH59 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
TRBV5-4A0A0C4DH59 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 FAM86LP-201ENST00000478302 853 ntBASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 AL662799.1-202ENST00000614205 422 ntBASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC148477.4-201ENST00000613430 1793 ntBASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC023157.3-201ENST00000619086 2088 ntBASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRBV5-4A0A0C4DH59 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AL391825.1-201ENST00000457671 1364 ntBASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC236430.1-201ENST00000402231 743 ntBASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 MIR4745-201ENST00000577608 62 ntBASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AL132655.2-201ENST00000596276 594 ntBASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-4A0A0C4DH59 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC023024.2-201ENST00000623561 1993 ntBASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV5-4A0A0C4DH59 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms