Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 KRT18P13-201ENST00000400056 1290 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AC023141.5-201ENST00000458585 616 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AC018529.1-201ENST00000613063 361 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AC084121.4-201ENST00000641598 221 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AF228730.8-201ENST00000642140 221 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 CYP4F24P-201ENST00000586049 1580 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 AC018892.3-201ENST00000623986 2499 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 ST20-AS1-201ENST00000560255 4223 ntBASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV1A0A0A0MS02 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 FAM58DP-201ENST00000428076 619 ntBASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 CNN2P11-201ENST00000429351 262 ntBASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 AL596442.2-201ENST00000610240 980 ntBASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 MIR6080-201ENST00000617359 66 ntBASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TRGV1A0A0A0MS02 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms