Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 AC074386.1-202ENST00000463561 864 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 MPDU1-223ENST00000582151 728 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 AL513190.1-201ENST00000621254 727 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 AC092865.6-201ENST00000642101 219 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 AL592424.1-201ENST00000563624 1536 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 AC105250.1-201ENST00000509378 2057 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 OR2I1P-209ENST00000641730 5365 ntBASIC15.21■□□□□ 0.02
AP4B1Q9Y6B7 SBF1P1-201ENST00000444527 5631 ntBASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 MIR4492-201ENST00000581627 80 ntBASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 AC012569.1-201ENST00000591191 1524 ntBASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 FGD5P1-202ENST00000614866 2498 ntBASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4B1Q9Y6B7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 YBX2P1-201ENST00000394192 760 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms