Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 AL008707.1-201ENST00000422498 534 ntBASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 AC009779.1-201ENST00000551138 283 ntBASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 RN7SL555P-201ENST00000584742 339 ntBASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CDC42BPBQ9Y5S2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 REXO1L4P-201ENST00000605109 1937 ntBASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 AL162426.1-201ENST00000624141 743 ntBASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 AL805961.1-203ENST00000641078 1258 ntBASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 MST1L-201ENST00000442552 2185 ntBASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC23.15■■□□□ 1.3
CDC42BPBQ9Y5S2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 HLA-J-204ENST00000495278 958 ntBASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDC42BPBQ9Y5S2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 AC024909.3-201ENST00000611513 2257 ntBASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDC42BPBQ9Y5S2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms