Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC024909.3-201ENST00000611513 2257 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC112504.1-201ENST00000623415 1841 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AL603832.2-201ENST00000566195 2125 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 KRT8P22-201ENST00000562317 1415 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LINC02199-201ENST00000506655 2702 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 INTS4P2-202ENST00000614726 2019 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AL162726.2-201ENST00000438986 1017 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 GPR53P-205ENST00000457298 1084 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 VDAC1P7-201ENST00000462417 847 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AC010319.3-201ENST00000597028 470 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 CU634019.7-201ENST00000624153 1185 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 FP236241.2-201ENST00000624906 1185 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00588Q9Y4M8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC00588Q9Y4M8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00588Q9Y4M8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms