Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3HCC1Q9Y3T6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 PGAM5P1-201ENST00000518923 814 ntBASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 MYO15B-237ENST00000642007 4893 ntBASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3HCC1Q9Y3T6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
R3HCC1Q9Y3T6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
R3HCC1Q9Y3T6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3HCC1Q9Y3T6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3HCC1Q9Y3T6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.14■□□□□ 0.5
R3HCC1Q9Y3T6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3HCC1Q9Y3T6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 AC004832.2-201ENST00000426397 482 ntBASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 DUX4L17-201ENST00000557360 1267 ntBASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 AL513190.1-201ENST00000621254 727 ntBASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3HCC1Q9Y3T6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms